May 28th 2010
Kyoto University, Uji, Kyoto 611-0011, Japan
Bioinformatics Center, Institute for Chemical Research,
3F, Seminar Room CB316.
| Tatsuya Akutsu | Institute for Chemical Research, Kyoto University, Japan |
| Gauvain Bourgne | National Institute of Informatics, Japan |
| Morihiro Hayashida | Institute for Chemical Research, Kyoto University, Japan |
| Matej Holec | Czech Technical University in Prague, Czech |
| Katsumi Inoue | National Institute of Informatics, Japan |
| Yuki Kato | Institute for Chemical Research, Kyoto University, Japan |
| Takehide Soh | The Graduate University for Advanced Studies, Japan |
| Takeyuki Tamura | Institute for Chemical Research, Kyoto University, Japan | James Ray Wagner | McGill University, Canada |
| 10:00 - 10:40 | Tatsuya Akutsu: "A Bisection-Type Algorithm for Grammar-Based Compression of Ordered and Unordered Trees" [Abstract] |
| 10:40 - 11:20 | James Ray Wagner: "Understanding the Causes of Genetic Difference in Humans" [Abstract] |
| (100 minutes Break) | |
| 13:00 - 13:40 | Morihiro Hayashida: "Measuring the Similarity of Protein Structures and Biological Networks using Compression Algorithms" [Abstract] |
| 13:40 - 14:20 | Takehide Soh: "Identifying Necessary Reactions in Metabolic Pathways by Minimal Model Generation" [Abstract] |
| (20 minutes Break) | |
| 14:40 - 15:20 | Yuki Kato: "RactIP: Fast and Accurate Prediction of RNA-RNA Interaction using Integer Programming" [Abstract] |
| 15:20 - 16:00 | Matej Holec: "On Improving the Classification Accuracy of Machine Learning Methods on Gene Expression Data" [Abstract] |
| (20 minutes Break) | |
| 16:20 - 17:00 | Takeyuki Tamura: "Integer Programming-based Method for Completing Signaling Pathways and its Application to Analysis of Colorectal Cancer" [Abstract] |
| 17:00 - 17:40 | Katsumi Inoue: "Reasoning about Signaling Networks by Meta-level Abduction" [Abstract] |
Takehide Soh: soh at nii.ac.jp
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